Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn1Q9CWM4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn1Q9CWM4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn1Q9CWM4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn1Q9CWM4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pfdn1Q9CWM4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn1Q9CWM4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn1Q9CWM4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn1Q9CWM4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms