Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Gm21559-201ENSMUST00000220638 855 ntBASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Gm8587-201ENSMUST00000076538 843 ntBASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc43Q9CR29 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Gm44450-201ENSMUST00000199528 114 ntBASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc43Q9CR29 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Gm10013-201ENSMUST00000106074 672 ntBASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc43Q9CR29 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc43Q9CR29 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc43Q9CR29 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc43Q9CR29 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc43Q9CR29 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc43Q9CR29 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc43Q9CR29 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms