Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh4Q99MT2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Gm44450-201ENSMUST00000199528 114 ntBASIC15.68■□□□□ 0.1
Msh4Q99MT2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.68■□□□□ 0.1
Msh4Q99MT2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh4Q99MT2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.67■□□□□ 0.1
Msh4Q99MT2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.66■□□□□ 0.1
Msh4Q99MT2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms