Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scrt1Q99M85 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scrt1Q99M85 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.08□□□□□ -0.16
Scrt1Q99M85 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scrt1Q99M85 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Gm15173-201ENSMUST00000122049 433 ntBASIC14.07□□□□□ -0.16
Scrt1Q99M85 Gm14822-201ENSMUST00000122247 291 ntBASIC14.07□□□□□ -0.16
Scrt1Q99M85 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scrt1Q99M85 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm14494-201ENSMUST00000118786 435 ntBASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scrt1Q99M85 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.05□□□□□ -0.16
Scrt1Q99M85 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Gm13418-201ENSMUST00000119097 944 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms