Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Gm13216-201ENSMUST00000117145 591 ntBASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Gm18489-201ENSMUST00000172565 551 ntBASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b3Q921M3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Gm9682-201ENSMUST00000197505 556 ntBASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Sf3b3Q921M3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sf3b3Q921M3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sf3b3Q921M3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Sf3b3Q921M3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.26■□□□□ 0.67
Sf3b3Q921M3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b3Q921M3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b3Q921M3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b3Q921M3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sf3b3Q921M3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b3Q921M3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms