Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm8000-201ENSMUST00000188378 592 ntBASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Gm5364-201ENSMUST00000216789 889 ntBASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Dancr-204ENSMUST00000132389 2347 ntBASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb18Q91Y02 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Gm7230-201ENSMUST00000173026 815 ntBASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb18Q91Y02 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Gm15173-201ENSMUST00000122049 433 ntBASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb18Q91Y02 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb18Q91Y02 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb18Q91Y02 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdhb18Q91Y02 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb18Q91Y02 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb18Q91Y02 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb18Q91Y02 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms