Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.4■□□□□ 0.54
Trex1Q91XB0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Trex1Q91XB0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trex1Q91XB0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Gm27702-201ENSMUST00000184512 56 ntBASIC18.39■□□□□ 0.53
Trex1Q91XB0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.39■□□□□ 0.53
Trex1Q91XB0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trex1Q91XB0 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.38■□□□□ 0.53
Trex1Q91XB0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trex1Q91XB0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trex1Q91XB0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Gm11764-201ENSMUST00000120221 623 ntBASIC18.36■□□□□ 0.53
Trex1Q91XB0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trex1Q91XB0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.35■□□□□ 0.53
Trex1Q91XB0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms