Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Gm7367-201ENSMUST00000057611 492 ntBASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb11Q91UZ8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Mir3081-201ENSMUST00000175305 84 ntBASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Gm21362-201ENSMUST00000194272 928 ntBASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb11Q91UZ8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb11Q91UZ8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb11Q91UZ8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb11Q91UZ8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Ank2-226ENSMUST00000189368 339 ntBASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb11Q91UZ8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms