Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.66■□□□□ 0.26
Trim60Q8VI40 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trim60Q8VI40 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.66■□□□□ 0.26
Trim60Q8VI40 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.66■□□□□ 0.26
Trim60Q8VI40 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim60Q8VI40 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.65■□□□□ 0.26
Trim60Q8VI40 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.65■□□□□ 0.26
Trim60Q8VI40 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim60Q8VI40 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim60Q8VI40 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim60Q8VI40 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Gm26039-201ENSMUST00000158152 144 ntBASIC16.64■□□□□ 0.25
Trim60Q8VI40 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.64■□□□□ 0.25
Trim60Q8VI40 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.64■□□□□ 0.25
Trim60Q8VI40 Gm10566-201ENSMUST00000086739 996 ntBASIC16.64■□□□□ 0.25
Trim60Q8VI40 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim60Q8VI40 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Prob1-201ENSMUST00000097619 3021 ntBASIC16.63■□□□□ 0.25
Trim60Q8VI40 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim60Q8VI40 Gm37055-201ENSMUST00000191866 133 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms