Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Gm15165-201ENSMUST00000118140 502 ntBASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ndc1Q8VCB1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndc1Q8VCB1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndc1Q8VCB1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms