Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm1Q8VC85 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 App-207ENSMUST00000227737 2827 ntBASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Gm37722-201ENSMUST00000193757 208 ntBASIC15.43■□□□□ 0.06
Lsm1Q8VC85 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm1Q8VC85 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.42■□□□□ 0.06
Lsm1Q8VC85 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Gm27389-201ENSMUST00000183622 195 ntBASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm1Q8VC85 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm1Q8VC85 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms