Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.53■□□□□ 0.08
Rnf8Q8VC56 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Gm22697-201ENSMUST00000175194 63 ntBASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Rnf8Q8VC56 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.52■□□□□ 0.08
Rnf8Q8VC56 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf8Q8VC56 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Gm7213-201ENSMUST00000215977 950 ntBASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf8Q8VC56 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms