Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Ankra2-208ENSMUST00000226100 1476 ntBASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9Q8VC31 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc9Q8VC31 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9Q8VC31 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Gm12134-201ENSMUST00000122109 520 ntBASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms