Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdt1Q8R4E9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdt1Q8R4E9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Gm27525-201ENSMUST00000184465 107 ntBASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdt1Q8R4E9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdt1Q8R4E9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms