Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpp40Q8R1F9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpp40Q8R1F9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpp40Q8R1F9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp40Q8R1F9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44357-201ENSMUST00000195897 142 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm19658-201ENSMUST00000196231 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44367-201ENSMUST00000196836 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44350-201ENSMUST00000197197 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44390-201ENSMUST00000197533 144 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44313-201ENSMUST00000198018 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44486-201ENSMUST00000198508 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44314-201ENSMUST00000199263 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44394-201ENSMUST00000199558 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44484-201ENSMUST00000199873 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44466-201ENSMUST00000200264 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Gm44359-201ENSMUST00000200671 138 ntBASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp40Q8R1F9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Gm5864-201ENSMUST00000202263 970 ntBASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Gm9172-201ENSMUST00000212092 954 ntBASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Gm7461-201ENSMUST00000058918 827 ntBASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rpp40Q8R1F9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms