Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Gm5366-201ENSMUST00000215494 1338 ntBASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC21■□□□□ 0.95
Ddx54Q8K4L0 Gm27430-201ENSMUST00000184585 107 ntBASIC21■□□□□ 0.95
Ddx54Q8K4L0 Gm44333-201ENSMUST00000197168 107 ntBASIC21■□□□□ 0.95
Ddx54Q8K4L0 Gm7774-201ENSMUST00000200064 533 ntBASIC21■□□□□ 0.95
Ddx54Q8K4L0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC21■□□□□ 0.95
Ddx54Q8K4L0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Gm38318-201ENSMUST00000195769 1706 ntBASIC21■□□□□ 0.95
Ddx54Q8K4L0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ddx54Q8K4L0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx54Q8K4L0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Gm13823-201ENSMUST00000119930 345 ntBASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx54Q8K4L0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Gm18489-201ENSMUST00000172565 551 ntBASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx54Q8K4L0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx54Q8K4L0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ddx54Q8K4L0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms