Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcll1Q8JZS7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcll1Q8JZS7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcll1Q8JZS7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcll1Q8JZS7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Gm2651-201ENSMUST00000203560 838 ntBASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hmgcll1Q8JZS7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgcll1Q8JZS7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgcll1Q8JZS7 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.52■□□□□ 0.23
Hmgcll1Q8JZS7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgcll1Q8JZS7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgcll1Q8JZS7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Gm18622-201ENSMUST00000219361 595 ntBASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcll1Q8JZS7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Mir5131-201ENSMUST00000175426 93 ntBASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Gm6089-201ENSMUST00000197666 938 ntBASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hmgcll1Q8JZS7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Hmgcll1Q8JZS7 Gm7230-201ENSMUST00000173026 815 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms