Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rdh1Q8CGV4 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.58■□□□□ 0.09
Rdh1Q8CGV4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rdh1Q8CGV4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rdh1Q8CGV4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rdh1Q8CGV4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rdh1Q8CGV4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm15173-201ENSMUST00000122049 433 ntBASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.57■□□□□ 0.08
Rdh1Q8CGV4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh1Q8CGV4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms