Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc38Q8CDN8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc38Q8CDN8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc38Q8CDN8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc38Q8CDN8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms