Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Slc46a2Q8CA03 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Mir6982-201ENSMUST00000184354 68 ntBASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Timm23-208ENSMUST00000226683 750 ntBASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Slc46a2Q8CA03 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc46a2Q8CA03 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Slc46a2Q8CA03 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Slc46a2Q8CA03 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Slc46a2Q8CA03 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Slc46a2Q8CA03 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Gm18421-201ENSMUST00000204122 625 ntBASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Slc46a2Q8CA03 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms