Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsfm13Q8BXS2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Gm22697-201ENSMUST00000175194 63 ntBASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsfm13Q8BXS2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsfm13Q8BXS2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsfm13Q8BXS2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsfm13Q8BXS2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsfm13Q8BXS2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsfm13Q8BXS2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms