Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Olfr129-201ENSMUST00000122318 993 ntBASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Gm27742-201ENSMUST00000184667 60 ntBASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp43Q8BUM9 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.3■□□□□ 0.2
Usp43Q8BUM9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Mir6404-201ENSMUST00000183699 94 ntBASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp43Q8BUM9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Gm13312-201ENSMUST00000119631 718 ntBASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp43Q8BUM9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp43Q8BUM9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp43Q8BUM9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Usp43Q8BUM9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp43Q8BUM9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp43Q8BUM9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp43Q8BUM9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Usp43Q8BUM9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms