Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap1Q8BTW8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm4459-201ENSMUST00000118750 468 ntBASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm4535-201ENSMUST00000182274 558 ntBASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm10355-201ENSMUST00000097146 517 ntBASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap1Q8BTW8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cdk5rap1Q8BTW8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Cdk5rap1Q8BTW8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdk5rap1Q8BTW8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdk5rap1Q8BTW8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk5rap1Q8BTW8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms