Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ppp1r3eQ8BRJ4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppp1r3eQ8BRJ4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ppp1r3eQ8BRJ4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Ppp1r3eQ8BRJ4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.08■□□□□ 0.01
Ppp1r3eQ8BRJ4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ppp1r3eQ8BRJ4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ppp1r3eQ8BRJ4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Mir5122-201ENSMUST00000175004 89 ntBASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Gm21362-201ENSMUST00000194272 928 ntBASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp1r3eQ8BRJ4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 BC037039-201ENSMUST00000192003 2205 ntBASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Gm6433-201ENSMUST00000118634 875 ntBASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp1r3eQ8BRJ4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp1r3eQ8BRJ4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ppp1r3eQ8BRJ4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp1r3eQ8BRJ4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp1r3eQ8BRJ4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.05■□□□□ 0
Ppp1r3eQ8BRJ4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms