Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Gm12382-201ENSMUST00000122005 922 ntBASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.3□□□□□ -0.28
Smco3Q8BQM7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.29□□□□□ -0.28
Smco3Q8BQM7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smco3Q8BQM7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms