Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Gm11539-201ENSMUST00000119837 557 ntBASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Gm13436-201ENSMUST00000120418 567 ntBASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ckap4Q8BMK4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ckap4Q8BMK4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Ckap4Q8BMK4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ckap4Q8BMK4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Gm13559-201ENSMUST00000120476 863 ntBASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Prob1-201ENSMUST00000097619 3021 ntBASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ckap4Q8BMK4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms