Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.85■□□□□ 0.13
Ubp1Q811S7 Gm10819-201ENSMUST00000099988 561 ntBASIC15.85■□□□□ 0.13
Ubp1Q811S7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.85■□□□□ 0.13
Ubp1Q811S7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubp1Q811S7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Mir3081-201ENSMUST00000175305 84 ntBASIC15.84■□□□□ 0.13
Ubp1Q811S7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Gm17807-201ENSMUST00000186869 298 ntBASIC15.84■□□□□ 0.13
Ubp1Q811S7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubp1Q811S7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ubp1Q811S7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Ubp1Q811S7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ubp1Q811S7 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.83■□□□□ 0.13
Ubp1Q811S7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Ubp1Q811S7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.83■□□□□ 0.12
Ubp1Q811S7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ubp1Q811S7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.82■□□□□ 0.12
Ubp1Q811S7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ubp1Q811S7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.82■□□□□ 0.12
Ubp1Q811S7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ubp1Q811S7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms