Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm27628-201ENSMUST00000184911 107 ntBASIC15.44■□□□□ 0.06
Otop1Q80VM9 Gm10576-201ENSMUST00000191927 825 ntBASIC15.44■□□□□ 0.06
Otop1Q80VM9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.43■□□□□ 0.06
Otop1Q80VM9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.43■□□□□ 0.06
Otop1Q80VM9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Otop1Q80VM9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Otop1Q80VM9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Gm8097-201ENSMUST00000117903 829 ntBASIC15.42■□□□□ 0.06
Otop1Q80VM9 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.42■□□□□ 0.06
Otop1Q80VM9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.42■□□□□ 0.06
Otop1Q80VM9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Otop1Q80VM9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.41■□□□□ 0.06
Otop1Q80VM9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.41■□□□□ 0.06
Otop1Q80VM9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.41■□□□□ 0.06
Otop1Q80VM9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Otop1Q80VM9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.4■□□□□ 0.06
Otop1Q80VM9 Haglr-201ENSMUST00000100000 2085 ntBASIC15.4■□□□□ 0.06
Otop1Q80VM9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Otop1Q80VM9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Otop1Q80VM9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Otop1Q80VM9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Otop1Q80VM9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms