Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp8Q80U87 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.17■□□□□ 0.18
Usp8Q80U87 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.17■□□□□ 0.18
Usp8Q80U87 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp8Q80U87 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.16■□□□□ 0.18
Usp8Q80U87 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp8Q80U87 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Gm13559-201ENSMUST00000120476 863 ntBASIC16.16■□□□□ 0.18
Usp8Q80U87 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.16■□□□□ 0.18
Usp8Q80U87 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.16■□□□□ 0.18
Usp8Q80U87 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp8Q80U87 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Usp8Q80U87 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp8Q80U87 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Usp8Q80U87 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp8Q80U87 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Usp8Q80U87 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Usp8Q80U87 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Usp8Q80U87 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp8Q80U87 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.14■□□□□ 0.17
Usp8Q80U87 Gm7213-201ENSMUST00000215977 950 ntBASIC16.14■□□□□ 0.17
Usp8Q80U87 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp8Q80U87 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Usp8Q80U87 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Usp8Q80U87 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp8Q80U87 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.13■□□□□ 0.17
Usp8Q80U87 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.13■□□□□ 0.17
Usp8Q80U87 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Usp8Q80U87 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Usp8Q80U87 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms