Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Gm12260-201ENSMUST00000122447 411 ntBASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm13312-201ENSMUST00000119631 718 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44357-201ENSMUST00000195897 142 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm19658-201ENSMUST00000196231 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44367-201ENSMUST00000196836 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44350-201ENSMUST00000197197 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44390-201ENSMUST00000197533 144 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44313-201ENSMUST00000198018 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44486-201ENSMUST00000198508 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44454-201ENSMUST00000198541 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44314-201ENSMUST00000199263 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44394-201ENSMUST00000199558 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44484-201ENSMUST00000199873 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44466-201ENSMUST00000200264 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Gm44359-201ENSMUST00000200671 138 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Prpf38bQ80SY5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Prpf38bQ80SY5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38bQ80SY5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Gm10175-201ENSMUST00000086013 645 ntBASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms