Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.66■□□□□ 0.26
Cspg5Q71M36 Gm7862-201ENSMUST00000121461 292 ntBASIC16.66■□□□□ 0.26
Cspg5Q71M36 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.66■□□□□ 0.26
Cspg5Q71M36 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.66■□□□□ 0.26
Cspg5Q71M36 Gm5364-201ENSMUST00000216789 889 ntBASIC16.66■□□□□ 0.26
Cspg5Q71M36 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Gm15372-201ENSMUST00000120729 834 ntBASIC16.65■□□□□ 0.26
Cspg5Q71M36 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.65■□□□□ 0.26
Cspg5Q71M36 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.65■□□□□ 0.26
Cspg5Q71M36 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg5Q71M36 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cspg5Q71M36 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cspg5Q71M36 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.64■□□□□ 0.25
Cspg5Q71M36 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Rprl3-201ENSMUST00000157400 290 ntBASIC16.64■□□□□ 0.25
Cspg5Q71M36 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg5Q71M36 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.63■□□□□ 0.25
Cspg5Q71M36 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Dancr-204ENSMUST00000132389 2347 ntBASIC16.63■□□□□ 0.25
Cspg5Q71M36 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.63■□□□□ 0.25
Cspg5Q71M36 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg5Q71M36 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg5Q71M36 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg5Q71M36 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cspg5Q71M36 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg5Q71M36 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg5Q71M36 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms