Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nup188Q6ZQH8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup188Q6ZQH8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nup188Q6ZQH8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.98■□□□□ 0.63
Nup188Q6ZQH8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Nup188Q6ZQH8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Gm5745-201ENSMUST00000183748 313 ntBASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nup188Q6ZQH8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Gm12008-201ENSMUST00000117791 755 ntBASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup188Q6ZQH8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.62
Nup188Q6ZQH8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Gm43474-201ENSMUST00000196415 774 ntBASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nup188Q6ZQH8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Nup188Q6ZQH8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup188Q6ZQH8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nup188Q6ZQH8 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.92■□□□□ 0.62
Nup188Q6ZQH8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup188Q6ZQH8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nup188Q6ZQH8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup188Q6ZQH8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nup188Q6ZQH8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.92■□□□□ 0.62
Nup188Q6ZQH8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms