Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Gm12428-201ENSMUST00000119844 727 ntBASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn10aQ6QIY3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm25287-201ENSMUST00000103846 110 ntBASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm22918-201ENSMUST00000103855 110 ntBASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn10aQ6QIY3 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn10aQ6QIY3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn10aQ6QIY3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Gm22175-201ENSMUST00000175007 78 ntBASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn10aQ6QIY3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms