Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx58Q6Q899 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 AV026068-213ENSMUST00000223675 1171 ntBASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx58Q6Q899 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx58Q6Q899 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Gm27525-201ENSMUST00000184465 107 ntBASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.83■□□□□ 0.77
Ddx58Q6Q899 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.83■□□□□ 0.77
Ddx58Q6Q899 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ddx58Q6Q899 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx58Q6Q899 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx58Q6Q899 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx58Q6Q899 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx58Q6Q899 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx58Q6Q899 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx58Q6Q899 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx58Q6Q899 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Gm7222-201ENSMUST00000117512 906 ntBASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx58Q6Q899 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx58Q6Q899 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms