Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Gm15427-201ENSMUST00000117288 531 ntBASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Gm44335-201ENSMUST00000196879 141 ntBASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Gm44297-201ENSMUST00000198304 141 ntBASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Gm44346-201ENSMUST00000198851 141 ntBASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd4Q6PDQ2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Auts2-212ENSMUST00000178555 309 ntBASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd4Q6PDQ2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Gm14701-201ENSMUST00000117156 348 ntBASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chd4Q6PDQ2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd4Q6PDQ2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd4Q6PDQ2 Grk6-207ENSMUST00000225925 2769 ntBASIC20.83■□□□□ 0.92
Chd4Q6PDQ2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd4Q6PDQ2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd4Q6PDQ2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd4Q6PDQ2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd4Q6PDQ2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Haglr-201ENSMUST00000100000 2085 ntBASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd4Q6PDQ2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Gm5312-201ENSMUST00000203728 547 ntBASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms