Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ShbQ6PD21 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShbQ6PD21 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShbQ6PD21 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.33■□□□□ 0.37
ShbQ6PD21 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ShbQ6PD21 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShbQ6PD21 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Gm13223-201ENSMUST00000118609 747 ntBASIC17.33■□□□□ 0.36
ShbQ6PD21 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.33■□□□□ 0.36
ShbQ6PD21 Gm24158-201ENSMUST00000175263 71 ntBASIC17.33■□□□□ 0.36
ShbQ6PD21 Gm27306-201ENSMUST00000183970 107 ntBASIC17.33■□□□□ 0.36
ShbQ6PD21 Gm18246-201ENSMUST00000221023 728 ntBASIC17.33■□□□□ 0.36
ShbQ6PD21 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.33■□□□□ 0.36
ShbQ6PD21 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ShbQ6PD21 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.33■□□□□ 0.36
ShbQ6PD21 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShbQ6PD21 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ShbQ6PD21 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Gm13823-201ENSMUST00000119930 345 ntBASIC17.32■□□□□ 0.36
ShbQ6PD21 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.32■□□□□ 0.36
ShbQ6PD21 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.32■□□□□ 0.36
ShbQ6PD21 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.32■□□□□ 0.36
ShbQ6PD21 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.32■□□□□ 0.36
ShbQ6PD21 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShbQ6PD21 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ShbQ6PD21 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Gm25287-201ENSMUST00000103846 110 ntBASIC17.31■□□□□ 0.36
ShbQ6PD21 Gm22918-201ENSMUST00000103855 110 ntBASIC17.31■□□□□ 0.36
ShbQ6PD21 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.31■□□□□ 0.36
ShbQ6PD21 Gm5779-201ENSMUST00000218467 910 ntBASIC17.31■□□□□ 0.36
ShbQ6PD21 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Gm2423-201ENSMUST00000074863 733 ntBASIC17.31■□□□□ 0.36
ShbQ6PD21 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
ShbQ6PD21 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShbQ6PD21 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.3■□□□□ 0.36
ShbQ6PD21 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.3■□□□□ 0.36
ShbQ6PD21 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ShbQ6PD21 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.3■□□□□ 0.36
ShbQ6PD21 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.3■□□□□ 0.36
ShbQ6PD21 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.3■□□□□ 0.36
ShbQ6PD21 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.3■□□□□ 0.36
ShbQ6PD21 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.3■□□□□ 0.36
ShbQ6PD21 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShbQ6PD21 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ShbQ6PD21 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
ShbQ6PD21 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.29■□□□□ 0.36
ShbQ6PD21 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.29■□□□□ 0.36
ShbQ6PD21 Gm16198-201ENSMUST00000118766 670 ntBASIC17.29■□□□□ 0.36
ShbQ6PD21 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ShbQ6PD21 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.29■□□□□ 0.36
ShbQ6PD21 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ShbQ6PD21 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
ShbQ6PD21 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.29■□□□□ 0.36
ShbQ6PD21 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShbQ6PD21 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms