Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox17Q61473 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox17Q61473 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox17Q61473 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Sox17Q61473 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox17Q61473 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sox17Q61473 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox17Q61473 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.14■□□□□ 0.01
Sox17Q61473 Gm10602-201ENSMUST00000098239 609 ntBASIC15.14■□□□□ 0.01
Sox17Q61473 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sox17Q61473 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.14■□□□□ 0.01
Sox17Q61473 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.14■□□□□ 0.01
Sox17Q61473 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox17Q61473 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sox17Q61473 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.13■□□□□ 0.01
Sox17Q61473 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox17Q61473 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.13■□□□□ 0.01
Sox17Q61473 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox17Q61473 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox17Q61473 Gm7791-201ENSMUST00000219066 539 ntBASIC15.13■□□□□ 0.01
Sox17Q61473 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.13■□□□□ 0.01
Sox17Q61473 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Sox17Q61473 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox17Q61473 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.12■□□□□ 0.01
Sox17Q61473 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sox17Q61473 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.12■□□□□ 0.01
Sox17Q61473 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.12■□□□□ 0.01
Sox17Q61473 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sox17Q61473 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.12■□□□□ 0.01
Sox17Q61473 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sox17Q61473 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.12■□□□□ 0.01
Sox17Q61473 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox17Q61473 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.11■□□□□ 0.01
Sox17Q61473 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Phf7-203ENSMUST00000226565 1971 ntBASIC15.11■□□□□ 0.01
Sox17Q61473 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sox17Q61473 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.11■□□□□ 0.01
Sox17Q61473 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.11■□□□□ 0.01
Sox17Q61473 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms