Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Foxd3Q61060 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Foxd3Q61060 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.78□□□□□ -0.04
Foxd3Q61060 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.78□□□□□ -0.04
Foxd3Q61060 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Foxd3Q61060 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Foxd3Q61060 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.77□□□□□ -0.04
Foxd3Q61060 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Foxd3Q61060 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Foxd3Q61060 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxd3Q61060 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Foxd3Q61060 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Gm14859-201ENSMUST00000117752 357 ntBASIC14.77□□□□□ -0.05
Foxd3Q61060 Gm7284-201ENSMUST00000131667 944 ntBASIC14.77□□□□□ -0.05
Foxd3Q61060 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.77□□□□□ -0.05
Foxd3Q61060 Gm22697-201ENSMUST00000175194 63 ntBASIC14.77□□□□□ -0.05
Foxd3Q61060 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.77□□□□□ -0.05
Foxd3Q61060 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxd3Q61060 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Foxd3Q61060 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Foxd3Q61060 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.76□□□□□ -0.05
Foxd3Q61060 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.76□□□□□ -0.05
Foxd3Q61060 Gm7370-201ENSMUST00000219471 767 ntBASIC14.76□□□□□ -0.05
Foxd3Q61060 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxd3Q61060 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Foxd3Q61060 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.75□□□□□ -0.05
Foxd3Q61060 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxd3Q61060 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxd3Q61060 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxd3Q61060 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.75□□□□□ -0.05
Foxd3Q61060 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Foxd3Q61060 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxd3Q61060 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxd3Q61060 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.75□□□□□ -0.05
Foxd3Q61060 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxd3Q61060 Gm43514-201ENSMUST00000198852 424 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms