Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Rprl3-201ENSMUST00000157400 290 ntBASIC18.78■□□□□ 0.6
Prdm1Q60636 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.78■□□□□ 0.6
Prdm1Q60636 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prdm1Q60636 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prdm1Q60636 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prdm1Q60636 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.77■□□□□ 0.6
Prdm1Q60636 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Prdm1Q60636 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prdm1Q60636 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Prdm1Q60636 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.77■□□□□ 0.6
Prdm1Q60636 Gm44454-201ENSMUST00000198541 138 ntBASIC18.77■□□□□ 0.6
Prdm1Q60636 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.77■□□□□ 0.6
Prdm1Q60636 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prdm1Q60636 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prdm1Q60636 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prdm1Q60636 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prdm1Q60636 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prdm1Q60636 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.76■□□□□ 0.59
Prdm1Q60636 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Prdm1Q60636 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Prdm1Q60636 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.76■□□□□ 0.59
Prdm1Q60636 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Prdm1Q60636 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm1Q60636 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Prdm1Q60636 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.75■□□□□ 0.59
Prdm1Q60636 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Gm15165-201ENSMUST00000118140 502 ntBASIC18.75■□□□□ 0.59
Prdm1Q60636 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Gm17971-201ENSMUST00000190239 806 ntBASIC18.75■□□□□ 0.59
Prdm1Q60636 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.75■□□□□ 0.59
Prdm1Q60636 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.75■□□□□ 0.59
Prdm1Q60636 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Prdm1Q60636 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.75■□□□□ 0.59
Prdm1Q60636 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prdm1Q60636 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm1Q60636 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Prdm1Q60636 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Prdm1Q60636 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.74■□□□□ 0.59
Prdm1Q60636 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Prdm1Q60636 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Prdm1Q60636 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.74■□□□□ 0.59
Prdm1Q60636 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.74■□□□□ 0.59
Prdm1Q60636 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.74■□□□□ 0.59
Prdm1Q60636 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Prdm1Q60636 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm1Q60636 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms