Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Gm43530-201ENSMUST00000195920 274 ntBASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-1Q5R1I8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-1Q5R1I8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-1Q5R1I8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Gm9806-201ENSMUST00000051080 552 ntBASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-1Q5R1I8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms