Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Gm6089-201ENSMUST00000197666 938 ntBASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rc3h1Q4VGL6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Gm15173-201ENSMUST00000122049 433 ntBASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Gm43514-201ENSMUST00000198852 424 ntBASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rc3h1Q4VGL6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Gm7230-201ENSMUST00000173026 815 ntBASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rc3h1Q4VGL6 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.52■□□□□ 0.55
Rc3h1Q4VGL6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rc3h1Q4VGL6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Rc3h1Q4VGL6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rc3h1Q4VGL6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rc3h1Q4VGL6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Gm18622-201ENSMUST00000219361 595 ntBASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.51■□□□□ 0.55
Rc3h1Q4VGL6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms