Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nlrc4Q3UP24 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Dancr-204ENSMUST00000132389 2347 ntBASIC16.9■□□□□ 0.3
Nlrc4Q3UP24 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Nlrc4Q3UP24 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nlrc4Q3UP24 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
Nlrc4Q3UP24 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nlrc4Q3UP24 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Gm12644-201ENSMUST00000119935 606 ntBASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Gm25406-201ENSMUST00000157599 105 ntBASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Gm25745-201ENSMUST00000174945 133 ntBASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nlrc4Q3UP24 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms