Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Gm10566-201ENSMUST00000086739 996 ntBASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nhej1Q3KNJ2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhej1Q3KNJ2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Gm30025-201ENSMUST00000218555 728 ntBASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhej1Q3KNJ2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 App-207ENSMUST00000227737 2827 ntBASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhej1Q3KNJ2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nhej1Q3KNJ2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms