Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Gm13223-201ENSMUST00000118609 747 ntBASIC17.1■□□□□ 0.33
Col19a1Q0VF58 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Gm10253-201ENSMUST00000194270 940 ntBASIC17.1■□□□□ 0.33
Col19a1Q0VF58 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col19a1Q0VF58 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm22065-201ENSMUST00000103753 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm22066-201ENSMUST00000103761 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24932-201ENSMUST00000103763 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24115-201ENSMUST00000103799 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm22190-201ENSMUST00000103827 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm22191-201ENSMUST00000103831 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24721-201ENSMUST00000103849 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm28018-201ENSMUST00000103869 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm26399-201ENSMUST00000103937 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Rpph1-201ENSMUST00000175096 319 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm25349-201ENSMUST00000177728 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm23616-201ENSMUST00000177797 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm25871-201ENSMUST00000177816 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24752-201ENSMUST00000178240 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24496-201ENSMUST00000178287 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm25649-201ENSMUST00000178476 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm25548-201ENSMUST00000178681 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm23147-201ENSMUST00000178841 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm26095-201ENSMUST00000179270 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm22171-201ENSMUST00000179283 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm23936-201ENSMUST00000179354 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm22619-201ENSMUST00000179516 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm25255-201ENSMUST00000179579 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24755-201ENSMUST00000179691 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm26506-201ENSMUST00000179692 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm25086-201ENSMUST00000179931 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm23243-201ENSMUST00000180047 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24659-201ENSMUST00000180212 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm24169-201ENSMUST00000180244 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm23689-201ENSMUST00000180354 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm27359-201ENSMUST00000184153 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm27785-201ENSMUST00000184268 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm27466-201ENSMUST00000184396 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm27703-201ENSMUST00000184836 110 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm8969-201ENSMUST00000199694 526 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gm5779-201ENSMUST00000218467 910 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col19a1Q0VF58 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Col19a1Q0VF58 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col19a1Q0VF58 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col19a1Q0VF58 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.08■□□□□ 0.33
Col19a1Q0VF58 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Gm9385-201ENSMUST00000117563 472 ntBASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Iqck-206ENSMUST00000208658 2891 ntBASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col19a1Q0VF58 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms