Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col1a2Q01149 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col1a2Q01149 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col1a2Q01149 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col1a2Q01149 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Col1a2Q01149 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col1a2Q01149 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col1a2Q01149 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Gm4995-201ENSMUST00000117247 432 ntBASIC20.05■□□□□ 0.8
Col1a2Q01149 Gm11594-201ENSMUST00000122313 162 ntBASIC20.05■□□□□ 0.8
Col1a2Q01149 Gm12260-201ENSMUST00000122447 411 ntBASIC20.05■□□□□ 0.8
Col1a2Q01149 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.05■□□□□ 0.8
Col1a2Q01149 Gm5867-201ENSMUST00000063197 592 ntBASIC20.05■□□□□ 0.8
Col1a2Q01149 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col1a2Q01149 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.04■□□□□ 0.8
Col1a2Q01149 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Col1a2Q01149 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col1a2Q01149 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.03■□□□□ 0.8
Col1a2Q01149 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.03■□□□□ 0.8
Col1a2Q01149 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 Gm14494-201ENSMUST00000118786 435 ntBASIC20.03■□□□□ 0.8
Col1a2Q01149 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Col1a2Q01149 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.03■□□□□ 0.8
Col1a2Q01149 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.03■□□□□ 0.8
Col1a2Q01149 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Col1a2Q01149 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Col1a2Q01149 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col1a2Q01149 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.03■□□□□ 0.8
Col1a2Q01149 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col1a2Q01149 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.02■□□□□ 0.8
Col1a2Q01149 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.02■□□□□ 0.8
Col1a2Q01149 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Col1a2Q01149 Gm19164-201ENSMUST00000210667 640 ntBASIC20.02■□□□□ 0.8
Col1a2Q01149 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.02■□□□□ 0.8
Col1a2Q01149 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.02■□□□□ 0.8
Col1a2Q01149 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Col1a2Q01149 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col1a2Q01149 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col1a2Q01149 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col1a2Q01149 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
Col1a2Q01149 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.01■□□□□ 0.79
Col1a2Q01149 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.01■□□□□ 0.79
Col1a2Q01149 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col1a2Q01149 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col1a2Q01149 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms