Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lsm5P62322 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lsm5P62322 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.47□□□□□ -0.25
Lsm5P62322 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Lsm5P62322 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm5P62322 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.47□□□□□ -0.25
Lsm5P62322 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lsm5P62322 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Lsm5P62322 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Lsm5P62322 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lsm5P62322 Gm24841-201ENSMUST00000158676 357 ntBASIC13.46□□□□□ -0.25
Lsm5P62322 Gm27000-201ENSMUST00000182943 842 ntBASIC13.46□□□□□ -0.25
Lsm5P62322 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.46□□□□□ -0.25
Lsm5P62322 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Lsm5P62322 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm5P62322 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm5P62322 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm5P62322 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.46□□□□□ -0.26
Lsm5P62322 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm5P62322 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.46□□□□□ -0.26
Lsm5P62322 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm5P62322 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.45□□□□□ -0.26
Lsm5P62322 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Lsm5P62322 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.45□□□□□ -0.26
Lsm5P62322 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Gm17661-201ENSMUST00000170317 270 ntBASIC13.45□□□□□ -0.26
Lsm5P62322 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lsm5P62322 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lsm5P62322 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lsm5P62322 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm5P62322 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lsm5P62322 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lsm5P62322 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lsm5P62322 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Lsm5P62322 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.44□□□□□ -0.26
Lsm5P62322 Gm10517-202ENSMUST00000192970 758 ntBASIC13.44□□□□□ -0.26
Lsm5P62322 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.44□□□□□ -0.26
Lsm5P62322 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lsm5P62322 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Lsm5P62322 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm5P62322 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms