Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cks1bP61025 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Cks1bP61025 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cks1bP61025 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
Cks1bP61025 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cks1bP61025 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.5□□□□□ -0.57
Cks1bP61025 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cks1bP61025 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cks1bP61025 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cks1bP61025 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cks1bP61025 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.49□□□□□ -0.57
Cks1bP61025 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.49□□□□□ -0.57
Cks1bP61025 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Cks1bP61025 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.49□□□□□ -0.57
Cks1bP61025 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.49□□□□□ -0.57
Cks1bP61025 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.49□□□□□ -0.57
Cks1bP61025 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cks1bP61025 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cks1bP61025 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1bP61025 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Gm13401-201ENSMUST00000117074 291 ntBASIC11.48□□□□□ -0.57
Cks1bP61025 Gm11643-201ENSMUST00000119578 864 ntBASIC11.48□□□□□ -0.57
Cks1bP61025 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.48□□□□□ -0.57
Cks1bP61025 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cks1bP61025 Mir2861-201ENSMUST00000175539 82 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms