Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.1■□□□□ 0.33
NrlP54846 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
NrlP54846 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NrlP54846 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NrlP54846 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.1■□□□□ 0.33
NrlP54846 Gm12497-201ENSMUST00000138778 237 ntBASIC17.1■□□□□ 0.33
NrlP54846 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.1■□□□□ 0.33
NrlP54846 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NrlP54846 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.1■□□□□ 0.33
NrlP54846 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.1■□□□□ 0.33
NrlP54846 Gm15590-201ENSMUST00000078419 552 ntBASIC17.1■□□□□ 0.33
NrlP54846 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NrlP54846 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.1■□□□□ 0.33
NrlP54846 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.09■□□□□ 0.33
NrlP54846 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.09■□□□□ 0.33
NrlP54846 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NrlP54846 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
NrlP54846 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.09■□□□□ 0.33
NrlP54846 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NrlP54846 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NrlP54846 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.08■□□□□ 0.33
NrlP54846 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NrlP54846 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NrlP54846 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NrlP54846 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NrlP54846 Gm6089-201ENSMUST00000197666 938 ntBASIC17.08■□□□□ 0.32
NrlP54846 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 AV026068-213ENSMUST00000223675 1171 ntBASIC17.08■□□□□ 0.32
NrlP54846 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NrlP54846 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NrlP54846 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.08■□□□□ 0.32
NrlP54846 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NrlP54846 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NrlP54846 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NrlP54846 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.07■□□□□ 0.32
NrlP54846 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Gm8097-201ENSMUST00000117903 829 ntBASIC17.07■□□□□ 0.32
NrlP54846 Gm4459-201ENSMUST00000118750 468 ntBASIC17.07■□□□□ 0.32
NrlP54846 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.07■□□□□ 0.32
NrlP54846 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Gm6550-201ENSMUST00000187574 993 ntBASIC17.07■□□□□ 0.32
NrlP54846 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.07■□□□□ 0.32
NrlP54846 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
NrlP54846 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.07■□□□□ 0.32
NrlP54846 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NrlP54846 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms