Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Msh6P54276 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.29■□□□□ 0.84
Msh6P54276 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Msh6P54276 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.29■□□□□ 0.84
Msh6P54276 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh6P54276 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Msh6P54276 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.28■□□□□ 0.84
Msh6P54276 Gm15920-201ENSMUST00000118998 402 ntBASIC20.28■□□□□ 0.84
Msh6P54276 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.28■□□□□ 0.84
Msh6P54276 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.28■□□□□ 0.84
Msh6P54276 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Msh6P54276 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.28■□□□□ 0.84
Msh6P54276 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh6P54276 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Msh6P54276 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Msh6P54276 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Msh6P54276 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh6P54276 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Msh6P54276 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.27■□□□□ 0.83
Msh6P54276 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.27■□□□□ 0.83
Msh6P54276 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.27■□□□□ 0.83
Msh6P54276 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Msh6P54276 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.26■□□□□ 0.83
Msh6P54276 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.26■□□□□ 0.83
Msh6P54276 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Msh6P54276 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Msh6P54276 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.26■□□□□ 0.83
Msh6P54276 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Msh6P54276 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.26■□□□□ 0.83
Msh6P54276 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.26■□□□□ 0.83
Msh6P54276 Gm18622-201ENSMUST00000219361 595 ntBASIC20.26■□□□□ 0.83
Msh6P54276 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.26■□□□□ 0.83
Msh6P54276 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.26■□□□□ 0.83
Msh6P54276 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Msh6P54276 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Msh6P54276 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh6P54276 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Msh6P54276 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh6P54276 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.25■□□□□ 0.83
Msh6P54276 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.25■□□□□ 0.83
Msh6P54276 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.25■□□□□ 0.83
Msh6P54276 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.25■□□□□ 0.83
Msh6P54276 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.25■□□□□ 0.83
Msh6P54276 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Msh6P54276 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.25■□□□□ 0.83
Msh6P54276 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh6P54276 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh6P54276 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Msh6P54276 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Msh6P54276 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Msh6P54276 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Msh6P54276 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Msh6P54276 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms