Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.56□□□□□ -0.08
Rfx3P48381 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Rfx3P48381 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Rfx3P48381 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rfx3P48381 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Rfx3P48381 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rfx3P48381 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rfx3P48381 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.55□□□□□ -0.08
Rfx3P48381 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Mir5130-201ENSMUST00000175160 84 ntBASIC14.55□□□□□ -0.08
Rfx3P48381 Gm7977-201ENSMUST00000193787 748 ntBASIC14.55□□□□□ -0.08
Rfx3P48381 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.55□□□□□ -0.08
Rfx3P48381 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.55□□□□□ -0.08
Rfx3P48381 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Rfx3P48381 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rfx3P48381 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rfx3P48381 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rfx3P48381 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx3P48381 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rfx3P48381 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.54□□□□□ -0.08
Rfx3P48381 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rfx3P48381 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Rfx3P48381 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rfx3P48381 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rfx3P48381 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.54□□□□□ -0.08
Rfx3P48381 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx3P48381 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfx3P48381 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfx3P48381 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfx3P48381 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rfx3P48381 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Gm43799-201ENSMUST00000201845 579 ntBASIC14.53□□□□□ -0.08
Rfx3P48381 Gm18959-201ENSMUST00000208954 655 ntBASIC14.53□□□□□ -0.08
Rfx3P48381 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rfx3P48381 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfx3P48381 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rfx3P48381 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfx3P48381 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx3P48381 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms